Tulane Cancer Center NGS Analysis Core

Overview of Services

Established in August 2010, the Tulane Cancer Center Next Generation Sequence (NGS) Bioinformatics Core is dedicated to advancing research by providing comprehensive processing and analysis of high-throughput sequencing data. Located on the eighth floor of the Louisiana Cancer Research Center in New Orleans, Louisiana, our Core offers a range of services to support investigators in their genomic research endeavors.

Our Core specializes in both standard and custom analyses across various high-throughput sequencing applications.  Key services include:

  • Standard Processing Pipelines:  We offer established pipelines for RNA-Seq data, ensuring efficient and accurate analysis of gene expression profiles.
  • Custom Analysis Pipeline Development:  Recognizing that each research project is unique, we collaborate with investigators to develop tailored analysis pipelines that address specific research questions and data characteristics.
  • Data Interpretation Assistance:  Our team provides guidance in interpreting complex sequencing data, helping researchers derive meaningful biological insights.
  • Computational Resources:  The Core is equipped with MacPro computers and Synology units for processing and storage of large-scale sequencing datasets.

By integrating these services, the Tulane Cancer Center NGS Analysis Core strives to support and enhance the genomic research efforts of our scientific community.

 

Pricing

Fees for Training/Consultations (per hour) and Bioinformatics services (per sample) are as follows:

$60 (Internal)

$100 (External Academic)

$150 (External Non-Academic)

 

 

 

Leadership

Melody Baddoo,MS Research Scientist I/Core Manager 504-988-1345 mbaddoo@tulane.edu
Erik Flemington, PhD Professor/Core Director 504-988-1167 erik@tulane.edu

 

Location and hours of operation

Hours Location

8AM - 5PM Monday - Friday

1700 Tulane Avenue
LCRC 820
New Orleans, LA. 70112

Links and Resources

  1. waveseq.tulane.edu

 

Acknowledging the Core

When presenting or publishing work that utilized services or resources from the Tulane Cancer Center Cancer Crusaders Next Generation Sequence Bioinformatics Core, please include the following acknowledgment statement:

"The authors acknowledge the Tulane Cancer Center Cancer Crusaders Next Generation Sequence Bioinformatics Core for assistance with [insert type of analysis performed]. In addition to foundational support from the Tulane Cancer Center, the Louisiana Cancer Research Center (LCRC), and Cancer Crusaders, the Core is supported in part by the NCI-funded P01 Program Project Grant (P01Ca214091) in partnership with the University of Florida, 'Gammaherpesvirus noncoding RNAs in AIDs malignancies', and the LSUHSC Tumor Virology COBRE. The content is solely the responsibiilty of the authors and does not necessarily represent the official views of the National Institutes of Health."

Contacts

Name Role Phone Email Location
Melody Baddoo, MS
Core Manager
 
504-988-1345
 
mbaddoo@tulane.edu
 
LCRC Room 810