IIHG Genome Sequencing Service

 

Genome Sequencing Service

 

The IIHG Genomics Division (formerly the DNA Facility) provides genomic or massively parallel DNA sequencing using the Illumina and Ion Torrent platforms. A custom LIMS facilitates sample management throughout the workflow. Users receive all information regarding sample preparation along with sequencing results. All data are backed up and archived. A powerful computer cluster supports data analysis. Members of the IIHG Bioinformatics Division perform a preliminary analysis (e.g., assembly, alignment, etc.) on all runs.


Click here to access the IIHG Genome Sequencing site for detailed information about the core.

 

The applications supported by the service include:

 

  • Custom and whole exome sequence target capture
  • RNA-Seq (quantification of transcript, i.e., expression analysis)
  • smRNA discovery and quantification
  • DNA-Seq (Resequencing)
  • ChIP-Seq
  • Methyl-Seq
  • De novo Sequencing

 

 

The Genome Sequencing Service is located in:

 

Room 300H Eckstein Medical Research Building (EMRB)

 

  • The sequencing service is open from 8:00 AM to 5:00 PM M-F.
  • Samples for sequencing may be dropped off anytime during these hours.


Address:

Genome Sequencing Service

University of Iowa

300H EMRB

Iowa City, IA  52242


Contacts

Name Role Phone Email Location
Jennifer Bair
Technical Staff
 
319-335-6736
 
dna.genomeseq@gmail.com
 
300H EMRB
 
Einat Snir
Technical Staff
 
319-335-6736
 
dna.genomeseq@gmail.com
 
300H EMRB
 
Mari Eyestone
Technical Staff
 
319-335-6736
 
dna.genomeseq@gmail.com
 
300H EMRB
 
Kevin Knudtson, Ph.D.
Director
 
319-335-7251
 
kevin-knudtson@uiowa.edu
 
323 EMRB
 
Jan Fuller
Administrator
 
319-335-7923
 
jan-fuller@uiowa.edu
 
329 EMRB